Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sel1 repeat-containing protein | SAMN04487832_10540 | Not Available | + | 1410309 - 1410560 | 9502.26 |
| hypothetical protein | SAMN04487832_10541 | Not Available | + | 1410614 - 1411654 | 37617.7 |
| hypothetical protein | SAMN04487832_10542 | Not Available | + | 1411668 - 1411889 | 8202.72 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN04487832_10543 | Not Available | + | 1411965 - 1413011 | 38932.9 |
| uncharacterized conserved protein yegl, contains vwa domain of tery type | SAMN04487832_10544 | Not Available | + | 1413105 - 1413725 | 22794.3 |
| hypothetical protein | SAMN04487832_10545 | Not Available | + | 1413722 - 1413898 | 6664.41 |
| hypothetical protein | SAMN04487832_10546 | Not Available | + | 1413909 - 1414124 | 8066.63 |
| hypothetical protein | SAMN04487832_10547 | Not Available | + | 1414183 - 1414365 | 6908.14 |
| hypothetical protein | SAMN04487832_10548 | Not Available | + | 1414681 - 1415439 | 29771.4 |
| hypothetical protein | SAMN04487832_10549 | Not Available | + | 1415429 - 1416187 | 29459.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.