Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN04487832_10530 | Not Available | + | 1399747 - 1399989 | 8879.72 |
| na+-driven multidrug efflux pump | SAMN04487832_10531 | Not Available | - | 1400085 - 1401395 | 49448.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN04487832_10532 | Not Available | + | 1401743 - 1402741 | 38028.4 |
| fic family protein | SAMN04487832_10533 | Not Available | - | 1402793 - 1404001 | 46472.7 |
| dna-binding transcriptional regulator, xre family | SAMN04487832_10534 | Not Available | - | 1404292 - 1404501 | 7979.59 |
| site-specific recombinase xerd | SAMN04487832_10535 | Not Available | - | 1404653 - 1405798 | 43746.4 |
| aaa+-type atpase, spovk/ycf46/vps4 family | SAMN04487832_10536 | Not Available | + | 1406063 - 1407541 | 54876.6 |
| leucine rich repeat-containing protein | SAMN04487832_10537 | Not Available | + | 1407610 - 1408506 | 34082.2 |
| leucine rich repeat-containing protein | SAMN04487832_10538 | Not Available | + | 1408540 - 1409184 | 23578.2 |
| sel1 repeat-containing protein | SAMN04487832_10539 | Not Available | + | 1409222 - 1410340 | 42631.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.