Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_10520 | Not Available | - | 1380311 - 1380904 | 22273.9 |
| dna helicase hera, contains has-barrel and atpase domains | SAMN04487832_10521 | Not Available | - | 1380909 - 1384313 | 125763.0 |
| tpr repeat | SAMN04487832_10522 | Not Available | - | 1384329 - 1387331 | 115039.0 |
| hypothetical protein | SAMN04487832_10523 | Not Available | - | 1387649 - 1388047 | 15681.1 |
| helix-turn-helix domain-containing protein | SAMN04487832_10524 | Not Available | - | 1388044 - 1388355 | 11551.2 |
| helicase conserved c-terminal domain-containing protein | SAMN04487832_10525 | Not Available | - | 1388511 - 1393742 | 198554.0 |
| hypothetical protein | SAMN04487832_10526 | Not Available | - | 1393748 - 1394752 | 38603.1 |
| hypothetical protein | SAMN04487832_10527 | Not Available | - | 1394745 - 1397435 | 101740.0 |
| hypothetical protein | SAMN04487832_10528 | Not Available | - | 1397437 - 1399011 | 59914.6 |
| uncharacterized spbc2 prophage-derived protein yoqj | SAMN04487832_10529 | Not Available | - | 1399123 - 1399602 | 18527.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.