Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_10510 | Not Available | - | 1368280 - 1368783 | 19080.8 |
| conserved hypothetical protein | SAMN04487832_10511 | Not Available | - | 1368783 - 1372217 | 126434.0 |
| hypothetical protein | SAMN04487832_10512 | Not Available | - | 1372474 - 1372722 | 9396.53 |
| protein of unknown function | SAMN04487832_10513 | Not Available | - | 1372799 - 1375981 | 123553.0 |
| crispr associated protein cas1 | SAMN04487832_10514 | Not Available | - | 1376270 - 1376455 | 6849.43 |
| pam-interacting domain of crispr-associated endonuclease cas9 | SAMN04487832_10515 | Not Available | - | 1376452 - 1377597 | 43363.1 |
| hypothetical protein | SAMN04487832_10516 | Not Available | - | 1378544 - 1378774 | 9032.63 |
| protein of unknown function | SAMN04487832_10517 | Not Available | - | 1378767 - 1379279 | 19784.4 |
| protein of unknown function | SAMN04487832_10518 | Not Available | - | 1379279 - 1379497 | 8412.92 |
| protein of unknown function | SAMN04487832_10519 | Not Available | - | 1379655 - 1380314 | 26243.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.