Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | SAMN04487832_104244 | Not Available | - | 1340624 - 1341823 | 43843.4 |
| elongation factor g | SAMN04487832_104245 | Not Available | - | 1341989 - 1344067 | 76502.1 |
| small subunit ribosomal protein s7 | SAMN04487832_104246 | Not Available | - | 1344086 - 1344556 | 17836.7 |
| small subunit ribosomal protein s12 | SAMN04487832_104247 | Not Available | - | 1344784 - 1345200 | 15231.6 |
| leucine rich repeat-containing protein | SAMN04487832_104248 | Not Available | - | 1345946 - 1348399 | 87860.0 |
| trk system potassium uptake protein trkh | SAMN04487832_104249 | Not Available | - | 1348491 - 1349930 | 52150.4 |
| trk system potassium uptake protein trka | SAMN04487832_104250 | Not Available | - | 1349949 - 1351307 | 50151.4 |
| molecular chaperone htpg | SAMN04487832_104251 | Not Available | - | 1351674 - 1353578 | 73332.0 |
| phosphoserine aminotransferase apoenzyme | SAMN04487832_104252 | Not Available | + | 1353901 - 1354986 | 40333.6 |
| d-3-phosphoglycerate dehydrogenase | SAMN04487832_104253 | Not Available | + | 1355061 - 1356224 | 41083.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.