Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative hemolysin | SAMN04487832_104234 | Not Available | + | 1323969 - 1325297 | 49394.2 |
| hypothetical protein | SAMN04487832_104235 | Not Available | - | 1325343 - 1326491 | 42722.5 |
| dna-directed rna polymerase subunit beta' | SAMN04487832_104236 | Not Available | - | 1326960 - 1330685 | 139064.0 |
| dna-directed rna polymerase subunit beta | SAMN04487832_104237 | Not Available | - | 1330784 - 1334698 | 146601.0 |
| fructoselysine 6-kinase | SAMN04487832_104238 | Not Available | + | 1335270 - 1336049 | 29188.3 |
| dockerin type i repeat-containing protein | SAMN04487832_104239 | Not Available | - | 1336216 - 1337238 | 36853.7 |
| multimeric flavodoxin wrba | SAMN04487832_104240 | Not Available | - | 1337477 - 1338421 | 34510.9 |
| hypothetical protein | SAMN04487832_104241 | Not Available | - | 1338839 - 1339333 | 17059.0 |
| hypothetical protein | SAMN04487832_104242 | Not Available | - | 1339347 - 1339943 | 22912.3 |
| mota/tolq/exbb proton channel family protein | SAMN04487832_104243 | Not Available | - | 1339940 - 1340458 | 19776.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.