Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_104224 | Not Available | + | 1310738 - 1311715 | 35003.9 |
| hypothetical protein | SAMN04487832_104225 | Not Available | - | 1311992 - 1312849 | 31389.4 |
| hypothetical protein | SAMN04487832_104226 | Not Available | - | 1313106 - 1314851 | 64861.7 |
| protein of unknown function | SAMN04487832_104227 | Not Available | - | 1315375 - 1315554 | 6672.81 |
| inhibitor of the kina pathway to sporulation, predicted exonuclease | SAMN04487832_104228 | Not Available | + | 1315886 - 1316851 | 36977.2 |
| cellobiose phosphorylase | SAMN04487832_104229 | Not Available | - | 1317206 - 1319587 | 89262.5 |
| histidinol-phosphatase (php family) | SAMN04487832_104230 | Not Available | - | 1319744 - 1320517 | 29535.9 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN04487832_104231 | Not Available | - | 1320529 - 1322205 | 62206.8 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN04487832_104232 | Not Available | - | 1322186 - 1322869 | 25043.2 |
| 4'-phosphopantetheinyl transferase | SAMN04487832_104233 | Not Available | - | 1322866 - 1323417 | 20472.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.