Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate synthase | SAMN04487832_104213 | Not Available | - | 1294185 - 1295375 | 44283.6 |
| hypothetical protein | SAMN04487832_104214 | Not Available | - | 1295385 - 1296293 | 34025.6 |
| hypothetical protein | SAMN04487832_104215 | Not Available | - | 1296372 - 1297349 | 36502.0 |
| nudix domain-containing protein | SAMN04487832_104216 | Not Available | + | 1297616 - 1298425 | 30596.5 |
| transcriptional regulator, xre family with cupin sensor | SAMN04487832_104217 | Not Available | - | 1298780 - 1301131 | 88095.7 |
| dna-binding transcriptional regulator, laci/purr family | SAMN04487832_104219 | Not Available | - | 1301872 - 1304091 | 82646.9 |
| enterochelin esterase | SAMN04487832_104220 | Not Available | - | 1304264 - 1307020 | 102368.0 |
| hypothetical protein | SAMN04487832_104221 | Not Available | - | 1306986 - 1307831 | 30347.8 |
| hypothetical protein | SAMN04487832_104222 | Not Available | - | 1308243 - 1309379 | 41782.1 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN04487832_104223 | Not Available | - | 1309384 - 1310382 | 37764.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.