Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487832_11434 | Not Available | - | 2833081 - 2834175 | 41356.4 |
| hypothetical protein | SAMN04487832_11435 | Not Available | - | 2834322 - 2834489 | 6209.31 |
| Tail protein | SAMN04487832_11436 | Not Available | - | 2834486 - 2834722 | 8698.65 |
| hypothetical protein | SAMN04487832_11437 | Not Available | - | 2834805 - 2835179 | 13828.5 |
| Hypothetical protein | SAMN04487832_11438 | Not Available | - | 2835265 - 2835624 | 13691.1 |
| Major tail protein | SAMN04487832_11439 | Not Available | - | 2835636 - 2836082 | 16060.6 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 1 - 258 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 21 - 1292 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 191 - 307 | 18.01 |
| mannan endo-1,4-beta-mannosidase | SAMN04487832_1011 | Not Available | - | 557 - 2770 | 81260.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.