Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN04487832_104203 | Not Available | + | 1282441 - 1283355 | 33643.4 |
| hypothetical protein | SAMN04487832_104204 | Not Available | + | 1283399 - 1284184 | 28920.7 |
| transketolase | SAMN04487832_104205 | Not Available | + | 1284353 - 1285192 | 30203.8 |
| transketolase | SAMN04487832_104206 | Not Available | + | 1285197 - 1286144 | 33218.3 |
| hypothetical protein | SAMN04487832_104207 | Not Available | + | 1286314 - 1286721 | 14245.3 |
| gdsl-like lipase/acylhydrolase family protein | SAMN04487832_104208 | Not Available | + | 1286790 - 1288118 | 47977.0 |
| bifunctional udp-n-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate n-acetyltransferase | SAMN04487832_104209 | Not Available | - | 1288180 - 1289550 | 49020.6 |
| predicted hydrolase of the alpha/beta superfamily | SAMN04487832_104210 | Not Available | - | 1289554 - 1290723 | 44433.4 |
| hypothetical protein | SAMN04487832_104211 | Not Available | - | 1290819 - 1291022 | 7345.4 |
| pyruvate phosphate dikinase | SAMN04487832_104212 | Not Available | + | 1291362 - 1293986 | 95605.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.