Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_104193 | Not Available | + | 1275646 - 1275930 | 10622.0 |
| hypothetical protein | SAMN04487832_104194 | Not Available | + | 1275945 - 1276610 | 25542.9 |
| trna dimethylallyltransferase | SAMN04487832_104195 | Not Available | + | 1276594 - 1277547 | 36145.3 |
| host factor-i protein | SAMN04487832_104196 | Not Available | + | 1277652 - 1277891 | 8926.89 |
| hypothetical protein | SAMN04487832_104197 | Not Available | + | 1277904 - 1279175 | 47574.3 |
| hypothetical protein | SAMN04487832_104198 | Not Available | + | 1279165 - 1279869 | 25463.8 |
| cell division inhibitor sepf | SAMN04487832_104199 | Not Available | + | 1280004 - 1280489 | 17977.3 |
| rna-binding protein ylmh, contains s4-like domain | SAMN04487832_104200 | Not Available | + | 1280489 - 1281247 | 28317.1 |
| cell division initiation protein | SAMN04487832_104201 | Not Available | + | 1281260 - 1281880 | 22879.4 |
| signal peptidase ii | SAMN04487832_104202 | Not Available | + | 1281960 - 1282448 | 18197.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.