Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rod shape determining protein roda | SAMN04487832_104183 | Not Available | + | 1263138 - 1264298 | 42536.7 |
| leucine rich repeat-containing protein | SAMN04487832_104184 | Not Available | + | 1264420 - 1265670 | 43171.0 |
| leucine rich repeat-containing protein | SAMN04487832_104185 | Not Available | + | 1265925 - 1266971 | 37565.4 |
| pp_01046 | SAMN04487832_104186 | Not Available | + | 1267164 - 1268555 | Not Available |
| hypothetical protein | SAMN04487832_104187 | Not Available | + | 1268557 - 1269342 | 28854.9 |
| cell fate regulator ylbf, yhea/ymca/duf963 family (controls sporulation, competence, biofilm development) | SAMN04487832_104188 | Not Available | + | 1269368 - 1269772 | 14818.5 |
| hypothetical protein | SAMN04487832_104189 | Not Available | + | 1269785 - 1270393 | 22515.5 |
| dna mismatch repair protein muts | SAMN04487832_104190 | Not Available | + | 1270418 - 1273039 | 96989.6 |
| hypothetical protein | SAMN04487832_104191 | Not Available | + | 1273055 - 1273480 | 16151.3 |
| dna mismatch repair protein mutl | SAMN04487832_104192 | Not Available | + | 1273590 - 1275626 | 75531.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.