Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, yigz family | SAMN04487832_104173 | Not Available | - | 1251129 - 1251848 | 26648.9 |
| large subunit ribosomal protein l31 | SAMN04487832_104174 | Not Available | - | 1251811 - 1252014 | 7732.41 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN04487832_104175 | Not Available | + | 1252531 - 1255263 | 100644.0 |
| hypothetical protein | SAMN04487832_104176 | Not Available | + | 1255309 - 1256403 | 40084.0 |
| membrane protein implicated in regulation of membrane protease activity | SAMN04487832_104177 | Not Available | + | 1256581 - 1257012 | 15650.3 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN04487832_104178 | Not Available | + | 1257066 - 1258025 | 35736.8 |
| 1,4-alpha-glucan branching enzyme | SAMN04487832_104179 | Not Available | - | 1258166 - 1259956 | 69684.7 |
| transcriptional regulator, tetr family | SAMN04487832_104180 | Not Available | + | 1260149 - 1260682 | 20759.2 |
| hypothetical protein | SAMN04487832_104181 | Not Available | + | 1260784 - 1261536 | 27840.0 |
| magnesium chelatase family protein | SAMN04487832_104182 | Not Available | + | 1261551 - 1263098 | 56040.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.