Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell division transport system permease protein | SAMN04487832_104163 | Not Available | + | 1238827 - 1239735 | 33614.2 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN04487832_104164 | Not Available | + | 1239781 - 1241247 | 53375.7 |
| carboxyl-terminal processing protease | SAMN04487832_104165 | Not Available | + | 1241378 - 1242541 | 42147.6 |
| phosphoglucomutase | SAMN04487832_104166 | Not Available | + | 1242804 - 1244519 | 63637.1 |
| hypothetical protein | SAMN04487832_104167 | Not Available | - | 1244406 - 1244786 | 13948.9 |
| rna polymerase primary sigma factor | SAMN04487832_104168 | Not Available | - | 1244903 - 1245994 | 41361.1 |
| rna polymerase primary sigma factor | SAMN04487832_104169 | Not Available | - | 1246010 - 1247092 | 40669.6 |
| transglutaminase-like superfamily protein | SAMN04487832_104170 | Not Available | - | 1247139 - 1248251 | 42887.4 |
| dna primase | SAMN04487832_104171 | Not Available | - | 1248278 - 1250029 | 66062.3 |
| dgtpase | SAMN04487832_104172 | Not Available | - | 1250037 - 1251032 | 37860.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.