Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| six-cysteine peptide sciff | SAMN04487832_104153 | Not Available | - | 1228294 - 1228431 | 4816.82 |
| magnesium transporter | SAMN04487832_104154 | Not Available | - | 1228588 - 1229523 | 35444.4 |
| phosphoserine phosphatase | SAMN04487832_104155 | Not Available | + | 1229952 - 1230554 | 22459.1 |
| hypothetical protein | SAMN04487832_104156 | Not Available | + | 1230557 - 1231663 | 41495.3 |
| beta-1,4-mannooligosaccharide/beta-1, 4-mannosyl-n-acetylglucosamine phosphorylase | SAMN04487832_104157 | Not Available | + | 1231914 - 1232933 | 38956.0 |
| d-alanine-d-alanine ligase | SAMN04487832_104158 | Not Available | + | 1233197 - 1234270 | 38714.6 |
| uncharacterized beta-barrel protein ywib, duf1934 family | SAMN04487832_104159 | Not Available | + | 1234313 - 1234735 | 15607.3 |
| arginyl-trna synthetase | SAMN04487832_104160 | Not Available | + | 1234767 - 1236536 | 66053.0 |
| carbohydrate diacid regulator | SAMN04487832_104161 | Not Available | + | 1236794 - 1237879 | 40837.1 |
| cell division transport system atp-binding protein | SAMN04487832_104162 | Not Available | + | 1237994 - 1238830 | 30333.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.