Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative mn2+ efflux pump mntp | SAMN04487832_104133 | Not Available | - | 1210605 - 1211174 | 20356.6 |
| acetyltransferase (gnat) family protein | SAMN04487832_104134 | Not Available | - | 1211409 - 1211909 | 19083.0 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN04487832_104135 | Not Available | - | 1212167 - 1212901 | 27094.6 |
| predicted kinase | SAMN04487832_104136 | Not Available | - | 1212907 - 1213395 | 18551.1 |
| ribonuclease-3 family protein | SAMN04487832_104137 | Not Available | - | 1213388 - 1213819 | 16336.3 |
| gtp-binding protein | SAMN04487832_104138 | Not Available | - | 1213803 - 1215080 | 46502.4 |
| large subunit ribosomal protein l27 | SAMN04487832_104139 | Not Available | - | 1215151 - 1215432 | 10276.4 |
| hypothetical protein | SAMN04487832_104140 | Not Available | - | 1215435 - 1215749 | 11201.3 |
| large subunit ribosomal protein l21 | SAMN04487832_104141 | Not Available | - | 1215755 - 1216066 | 11246.6 |
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN04487832_104142 | Not Available | - | 1216308 - 1218278 | 71551.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.