Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerate dehydrogenase | SAMN04487832_104123 | Not Available | + | 1197921 - 1198868 | 34533.2 |
| glutamate 5-kinase | SAMN04487832_104124 | Not Available | + | 1198840 - 1199676 | 30131.5 |
| glutamate-5-semialdehyde dehydrogenase | SAMN04487832_104125 | Not Available | + | 1200110 - 1201357 | 44805.0 |
| hypothetical protein | SAMN04487832_104126 | Not Available | + | 1201382 - 1203439 | 75971.0 |
| hypothetical protein | SAMN04487832_104127 | Not Available | + | 1203508 - 1204032 | 19480.6 |
| protein of unknown function | SAMN04487832_104128 | Not Available | - | 1204344 - 1205474 | 42366.4 |
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN04487832_104129 | Not Available | - | 1205808 - 1207871 | 76442.6 |
| uncharacterized membrane protein | SAMN04487832_104130 | Not Available | + | 1208118 - 1208741 | 21754.6 |
| hypothetical protein | SAMN04487832_104131 | Not Available | - | 1208791 - 1209516 | 28061.2 |
| lyzozyme m1 (1,4-beta-n-acetylmuramidase), gh25 family | SAMN04487832_104132 | Not Available | - | 1209518 - 1210477 | 36139.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.