Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative aminopeptidase | SAMN04487832_11424 | Not Available | - | 2825647 - 2825964 | 12473.5 |
| Hypothetical protein | SAMN04487832_11425 | Not Available | - | 2825961 - 2826329 | 13241.0 |
| head-tail adaptor | SAMN04487832_11426 | Not Available | - | 2826316 - 2826681 | 13852.5 |
| uncharacterized phage protein (possible dna packaging) | SAMN04487832_11427 | Not Available | - | 2826681 - 2826959 | 10692.8 |
| Major capsid protein gp5 | SAMN04487832_11428 | Not Available | - | 2826980 - 2828236 | 46212.7 |
| Putative clp peptidase | SAMN04487832_11429 | Not Available | - | 2828292 - 2829221 | 33858.4 |
| Putative portal protein | SAMN04487832_11430 | Not Available | - | 2829222 - 2830595 | 52401.0 |
| Hypothetical protein | SAMN04487832_11431 | Not Available | + | 2830697 - 2831728 | 39157.7 |
| Terminase large subunit | SAMN04487832_11432 | Not Available | - | 2831731 - 2832528 | 30793.7 |
| Gp2, phage terminase, large subunit, putative | SAMN04487832_11433 | Not Available | - | 2832565 - 2832765 | 7400.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.