Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_104102 | Not Available | + | 1180748 - 1180966 | 7711.43 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN04487832_104103 | Not Available | + | 1181038 - 1181952 | 32959.2 |
| hypothetical protein | SAMN04487832_104104 | Not Available | + | 1182158 - 1182364 | 7528.25 |
| hypothetical protein | SAMN04487832_104105 | Not Available | + | 1182776 - 1182928 | 5778.64 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04487832_104106 | Not Available | - | 1182852 - 1183283 | 16411.4 |
| hypothetical protein | SAMN04487832_104107 | Not Available | - | 1183868 - 1184767 | 32812.9 |
| ribosomal protein s18 acetylase rimi | SAMN04487832_104108 | Not Available | - | 1185327 - 1185794 | 17628.2 |
| s1 rna binding domain protein | SAMN04487832_104109 | Not Available | - | 1185893 - 1186366 | 17997.2 |
| hypothetical protein | SAMN04487832_104110 | Not Available | - | 1186391 - 1186669 | 10534.6 |
| spore cortex biosynthesis protein yabq | SAMN04487832_104111 | Not Available | - | 1186778 - 1187224 | 16492.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.