Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor (superfamily ii helicase) | SAMN04487832_10492 | Not Available | + | 1165921 - 1169379 | 129658.0 |
| hypothetical protein | SAMN04487832_10493 | Not Available | + | 1169542 - 1170393 | 30404.4 |
| nte family protein | SAMN04487832_10494 | Not Available | + | 1170390 - 1171289 | 33229.6 |
| lysophospholipase l1 | SAMN04487832_10495 | Not Available | - | 1171561 - 1172511 | 33818.9 |
| alginate o-acetyltransferase complex protein algi | SAMN04487832_10496 | Not Available | - | 1172541 - 1173935 | 54552.9 |
| hypothetical protein | SAMN04487832_10497 | Not Available | + | 1174489 - 1175436 | 34198.0 |
| hypothetical protein | SAMN04487832_10498 | Not Available | + | 1175493 - 1176323 | 29880.4 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN04487832_10499 | Not Available | + | 1176343 - 1177416 | 41391.2 |
| fn3 associated | SAMN04487832_104100 | Not Available | - | 1177704 - 1179740 | 76079.3 |
| protein of unknown function | SAMN04487832_104101 | Not Available | + | 1180064 - 1180633 | 21122.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.