Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_10482 | Not Available | - | 1152898 - 1153344 | 16020.0 |
| gtp-binding protein lepa | SAMN04487832_10483 | Not Available | - | 1153364 - 1155166 | 66857.6 |
| nucleoside-diphosphate-sugar epimerase | SAMN04487832_10484 | Not Available | + | 1155571 - 1156584 | 37854.1 |
| hypothetical protein | SAMN04487832_10485 | Not Available | + | 1156598 - 1157776 | 42585.7 |
| pasta domain-containing protein | SAMN04487832_10486 | Not Available | - | 1158145 - 1160229 | 76546.6 |
| cystathionine beta-lyase family protein involved in aluminum resistance | SAMN04487832_10487 | Not Available | - | 1160428 - 1161708 | 45559.6 |
| hypothetical protein | SAMN04487832_10488 | Not Available | - | 1161698 - 1162498 | 30982.3 |
| endoglucanase | SAMN04487832_10489 | Not Available | - | 1162495 - 1163514 | 36816.5 |
| endoglucanase | SAMN04487832_10490 | Not Available | - | 1163517 - 1164527 | 35723.9 |
| peptidyl-trna hydrolase, pth1 family | SAMN04487832_10491 | Not Available | + | 1165273 - 1165899 | 23192.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.