Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sporulation protein, ylmc/ymxh family | SAMN04487832_10472 | Not Available | - | 1146777 - 1147043 | 10116.2 |
| lpxtg-motif cell wall anchor domain-containing protein | SAMN04487832_10473 | Not Available | - | 1147102 - 1147251 | 5164.53 |
| 2-iminoacetate synthase | SAMN04487832_10474 | Not Available | - | 1147645 - 1149096 | 54682.2 |
| tfox n-terminal domain-containing protein | SAMN04487832_10475 | Not Available | - | 1149155 - 1149469 | 12084.7 |
| putative iron-only hydrogenase system regulator | SAMN04487832_10476 | Not Available | - | 1149492 - 1149740 | 8834.69 |
| stage ii sporulation protein aa (anti-sigma f factor antagonist) | SAMN04487832_10477 | Not Available | + | 1150067 - 1150372 | 11174.9 |
| stage ii sporulation protein ab (anti-sigma f factor) | SAMN04487832_10478 | Not Available | + | 1150383 - 1150820 | 15892.3 |
| rna polymerase sporulation-specific sigma factor | SAMN04487832_10479 | Not Available | + | 1150810 - 1151466 | 24017.0 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN04487832_10480 | Not Available | - | 1151468 - 1152562 | 40939.8 |
| hypothetical protein | SAMN04487832_10481 | Not Available | - | 1152559 - 1152897 | 12473.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.