Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_10452 | Not Available | + | 1124910 - 1125860 | 35393.8 |
| c_gcaxxg_c_c family probable redox protein | SAMN04487832_10453 | Not Available | - | 1126239 - 1126709 | 17216.6 |
| comf family protein | SAMN04487832_10454 | Not Available | - | 1126706 - 1127371 | 24323.4 |
| putative n6-adenine-specific dna methylase | SAMN04487832_10455 | Not Available | - | 1127373 - 1128488 | 41517.1 |
| penicillin-binding protein 1a | SAMN04487832_10456 | Not Available | - | 1128551 - 1131187 | 96764.6 |
| hypothetical protein | SAMN04487832_10457 | Not Available | + | 1131397 - 1131735 | 12653.2 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04487832_10458 | Not Available | - | 1131728 - 1132321 | 21712.5 |
| hypothetical protein | SAMN04487832_10459 | Not Available | - | 1132457 - 1133041 | 20723.6 |
| nad(p)h-hydrate epimerase | SAMN04487832_10460 | Not Available | - | 1133092 - 1134786 | 60266.9 |
| hypothetical protein | SAMN04487832_10461 | Not Available | - | 1134898 - 1136058 | 44730.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.