Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dhhw protein | SAMN04487832_10432 | Not Available | + | 1098128 - 1099480 | 50738.4 |
| had-superfamily phosphatase, subfamily iiic/fkbh-like domain-containing protein | SAMN04487832_10433 | Not Available | + | 1099489 - 1101288 | 68593.2 |
| acyl carrier protein | SAMN04487832_10434 | Not Available | + | 1101281 - 1101526 | 9314.86 |
| hypothetical protein | SAMN04487832_10435 | Not Available | + | 1101523 - 1102413 | 33200.6 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN04487832_10436 | Not Available | + | 1102890 - 1103654 | 26866.2 |
| cu+-exporting atpase | SAMN04487832_10437 | Not Available | + | 1103665 - 1106184 | 92776.8 |
| transcriptional attenuator, lytr family | SAMN04487832_10438 | Not Available | + | 1106262 - 1108058 | 66642.6 |
| enterochelin esterase | SAMN04487832_10439 | Not Available | - | 1108442 - 1110073 | 58745.6 |
| lpxtg-motif cell wall anchor domain-containing protein | SAMN04487832_10440 | Not Available | + | 1110434 - 1113475 | 110205.0 |
| hypothetical protein | SAMN04487832_10441 | Not Available | + | 1113475 - 1113753 | 10543.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.