Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endo-1,4-beta-xylanase, gh35 family | SAMN04487832_10422 | Not Available | - | 1087849 - 1091877 | 144735.0 |
| double zinc ribbon | SAMN04487832_10423 | Not Available | - | 1092259 - 1092765 | 17957.2 |
| pyrimidine-nucleoside phosphorylase | SAMN04487832_10424 | Not Available | - | 1092869 - 1094131 | 44368.6 |
| sigmak-factor processing regulatory protein bofa | SAMN04487832_10425 | Not Available | - | 1094204 - 1094458 | 9044.52 |
| hypothetical protein | SAMN04487832_10426 | Not Available | - | 1094470 - 1094760 | 10201.3 |
| hypothetical protein | SAMN04487832_10427 | Not Available | - | 1094784 - 1095134 | 12581.3 |
| hypothetical protein | SAMN04487832_10428 | Not Available | - | 1095139 - 1095387 | 9010.96 |
| hypothetical protein | SAMN04487832_10429 | Not Available | + | 1095477 - 1095962 | 18193.5 |
| hypothetical protein | SAMN04487832_10430 | Not Available | + | 1096008 - 1096592 | 21831.7 |
| alginate o-acetyltransferase complex protein algi | SAMN04487832_10431 | Not Available | + | 1096720 - 1098117 | 52754.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.