Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pp_00874 | SAMN04487832_10412 | Not Available | + | 1075713 - 1076948 | Not Available |
| protein of unknown function | SAMN04487832_10413 | Not Available | + | 1077643 - 1079115 | 54906.7 |
| ribosomal protein s18 acetylase rimi | SAMN04487832_10414 | Not Available | - | 1079238 - 1079711 | 18600.3 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN04487832_10415 | Not Available | - | 1079701 - 1080843 | 43295.4 |
| oligogalacturonide abc transporter membrane protein | SAMN04487832_10416 | Not Available | - | 1080840 - 1081670 | 30817.6 |
| oligogalacturonide transport system permease protein | SAMN04487832_10417 | Not Available | - | 1081667 - 1082560 | 33121.1 |
| oligogalacturonide transport system substrate-binding protein | SAMN04487832_10418 | Not Available | - | 1082557 - 1083867 | 48101.2 |
| arac-type dna-binding protein | SAMN04487832_10419 | Not Available | + | 1084191 - 1085051 | 33569.6 |
| pasta domain-containing protein | SAMN04487832_10420 | Not Available | - | 1085356 - 1087170 | 67322.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_10421 | Not Available | - | 1087172 - 1087645 | 18360.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.