Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr04063 family pep-cterm/xrta system glycosyltransferase | EJD96_RS13710 | Not Available | + | 3038164 - 3039384 | 44151.7 |
| glycosyltransferase family 4 protein | EJD96_RS13715 | Not Available | + | 3039381 - 3040556 | 42717.4 |
| polysaccharide deacetylase family protein | EJD96_RS13720 | Not Available | + | 3040560 - 3041621 | 38911.3 |
| glycosyltransferase | EJD96_RS13725 | Not Available | + | 3041627 - 3042913 | 48153.4 |
| lipopolysaccharide biosynthesis protein | EJD96_RS13730 | Not Available | + | 3042910 - 3044424 | 53749.7 |
| xrta/pep-cterm system tpr-repeat protein prst | EJD96_RS13735 | Not Available | + | 3044558 - 3047332 | 98880.9 |
| acyl carrier protein | EJD96_RS13740 | Not Available | + | 3047341 - 3047592 | 9021.75 |
| hydrolase 2, exosortase a system-associated | EJD96_RS13745 | Not Available | + | 3047589 - 3048434 | 29837.3 |
| hydrolase 1, exosortase a system-associated | EJD96_RS13750 | Not Available | + | 3048424 - 3049281 | 31334.9 |
| choice-of-anchor e domain-containing protein | EJD96_RS13755 | Not Available | - | 3049380 - 3050063 | 23706.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.