Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Rice |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Herbaspirillum seropedicae SmR1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 205685 - 205698 | Not Available |
| Baseplate protein | HSERO_RS01010 | Not Available | - | 216307 - 217431 | 39832.7 |
| hypothetical protein | HSERO_RS01015 | Not Available | - | 217462 - 218649 | 43239.0 |
| hypothetical protein | HSERO_RS01020 | Not Available | - | 218672 - 219103 | 14637.7 |
| hypothetical protein | HSERO_RS01025 | Not Available | - | 219133 - 220320 | 42608.1 |
| Putative tail protein | HSERO_RS01030 | Not Available | - | 220331 - 220822 | 17949.2 |
| Tail protein | HSERO_RS01035 | Not Available | - | 220819 - 221499 | 25239.7 |
| Baseplate protein | HSERO_RS01040 | Not Available | - | 221503 - 222669 | 41514.6 |
| Possible outer wedge baseplate protein and lysozyme | HSERO_RS01045 | Not Available | - | 222666 - 223091 | 15503.6 |
| Phage baseplate assembly protein v | HSERO_RS01050 | Not Available | - | 223160 - 223753 | 20269.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
