Herbaspirillum seropedicae SmR1

SpirillaMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Herbaspirillum seropedicae is a small spiral-shaped bacteria originally isolated from herbaceous seed-bearing plants. Strain SmR1 is a spontaneous streptomycin resistant mutant of strain Z78 (ATCC 35893), which was isolated from Sorghum bicolor roots in Brazil in 1982. It is able to fix atmospheric N(2) under microaerobic conditions and grows well with N(2) as a sole nitrogen source. It is an endophytic diazotroph found in association with roots, stems and leaves of economically important graminaceous species such sugarcane, rice and maize, as well as at least 10 other Gramineae. Green-house and field experiments showed that inoculation with H. seropedicae increased the growth rates, crop yield and the dry weight of both roots and shoots of several plant species (adapted from PMID 8782693). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum seropedicae
StrainSmR1

Profile

Physiology
Gram staining propertiesNot Available
ShapeSpirilla
MobilityYes
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Rice
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Herbaspirillum seropedicae SmR1


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+205685 - 205698Not Available
Baseplate proteinHSERO_RS01010Not Available-216307 - 21743139832.7
hypothetical proteinHSERO_RS01015Not Available-217462 - 21864943239.0
hypothetical proteinHSERO_RS01020Not Available-218672 - 21910314637.7
hypothetical proteinHSERO_RS01025Not Available-219133 - 22032042608.1
Putative tail proteinHSERO_RS01030Not Available-220331 - 22082217949.2
Tail proteinHSERO_RS01035Not Available-220819 - 22149925239.7
Baseplate proteinHSERO_RS01040Not Available-221503 - 22266941514.6
Possible outer wedge baseplate protein and lysozymeHSERO_RS01045Not Available-222666 - 22309115503.6
Phage baseplate assembly protein vHSERO_RS01050Not Available-223160 - 22375320269.0

Displaying genes 1 – 10 of 4900 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites