Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pep-cterm-box response regulator transcription factor | EJD96_RS13610 | Not Available | - | 3011688 - 3013040 | 49577.2 |
| xrta/pep-cterm system histidine kinase prsk | EJD96_RS13615 | Not Available | - | 3013037 - 3015157 | 78522.1 |
| tigr03013 family xrta/pep-cterm system glycosyltransferase | EJD96_RS13620 | Not Available | - | 3015169 - 3016554 | 51984.3 |
| pep-cterm sorting domain-containing protein | EJD96_RS13625 | Not Available | + | 3017103 - 3017726 | 21383.0 |
| ydcf family protein | EJD96_RS13630 | Not Available | + | 3017858 - 3018661 | 29383.0 |
| chondroitinase-b domain-containing protein | EJD96_RS13635 | Not Available | + | 3018658 - 3020094 | 50759.6 |
| nucleotide sugar dehydrogenase | EJD96_RS13640 | Not Available | + | 3020177 - 3021457 | 46258.5 |
| sdr family oxidoreductase | EJD96_RS13645 | Not Available | + | 3021483 - 3022526 | 38243.3 |
| gnat family n-acetyltransferase | EJD96_RS13650 | Not Available | + | 3022538 - 3023671 | 42369.1 |
| xrta system polysaccharide chain length determinant | EJD96_RS13655 | Not Available | + | 3024024 - 3025538 | 56041.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.