Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AU13965 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit iv | EJD96_RS12210 | Not Available | - | 2695530 - 2696006 | 17342.4 |
| cytochrome o ubiquinol oxidase subunit iii | EJD96_RS12215 | Not Available | - | 2696003 - 2696629 | 23277.8 |
| cytochrome o ubiquinol oxidase subunit i | EJD96_RS12220 | Not Available | - | 2696622 - 2698625 | 74671.8 |
| ubiquinol oxidase subunit ii | EJD96_RS12225 | Not Available | - | 2698702 - 2699634 | 34418.3 |
| mfs transporter | EJD96_RS12230 | Not Available | + | 2699795 - 2701138 | 47726.5 |
| putative zinc-binding metallopeptidase | EJD96_RS12235 | Not Available | - | 2701236 - 2702345 | 42062.1 |
| voltage-gated chloride channel family protein | EJD96_RS12240 | Not Available | + | 2702658 - 2703986 | 47241.4 |
| dienelactone hydrolase family protein | EJD96_RS12245 | Not Available | - | 2703993 - 2705156 | 41925.3 |
| pcc domain-containing protein | EJD96_RS12250 | Not Available | + | 2705448 - 2706314 | 31425.7 |
| response regulator | EJD96_RS12255 | Not Available | - | 2706441 - 2706809 | 12967.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
