Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysozyme inhibitor lpri family protein | EJD96_RS12110 | Not Available | + | 2674315 - 2675112 | 29098.3 |
| plp-dependent aminotransferase family protein | EJD96_RS12115 | Not Available | - | 2675122 - 2676531 | 51143.1 |
| alpha/beta fold hydrolase | EJD96_RS12120 | Not Available | + | 2676749 - 2677402 | 23150.9 |
| sdr family oxidoreductase | EJD96_RS12125 | Not Available | - | 2677419 - 2678162 | 26501.0 |
| arac family transcriptional regulator | EJD96_RS12130 | Not Available | + | 2678266 - 2679234 | 34867.0 |
| gntr family transcriptional regulator | EJD96_RS12135 | Not Available | - | 2679243 - 2679884 | 23618.5 |
| biotin synthase biob | EJD96_RS12140 | Not Available | + | 2679991 - 2681025 | 36516.7 |
| cytochrome p450 | EJD96_RS12145 | Not Available | + | 2681025 - 2682200 | 43258.3 |
| 8-amino-7-oxononanoate synthase | EJD96_RS12150 | Not Available | + | 2682193 - 2683350 | 40605.1 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | EJD96_RS12155 | Not Available | + | 2683347 - 2684693 | 48211.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.