Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| citryl-coa lyase | EJD96_RS11640 | Not Available | - | 2567748 - 2568518 | 27320.9 |
| class i adenylate-forming enzyme family protein | EJD96_RS11645 | Not Available | - | 2568529 - 2570100 | 56920.4 |
| sdr family nad(p)-dependent oxidoreductase | EJD96_RS11650 | Not Available | - | 2570177 - 2571025 | 29138.8 |
| mfs transporter | EJD96_RS11655 | Not Available | - | 2571025 - 2572359 | 48947.1 |
| iclr family transcriptional regulator | EJD96_RS11660 | Not Available | + | 2572749 - 2573531 | 28495.3 |
| type ii toxin-antitoxin system mqsa family antitoxin | EJD96_RS11665 | Not Available | + | 2574213 - 2574446 | 8988.55 |
| hypothetical protein | EJD96_RS11670 | Not Available | + | 2574556 - 2575647 | 41610.6 |
| hypothetical protein | EJD96_RS11675 | Not Available | - | 2575817 - 2575999 | 6296.18 |
| undecaprenyl-diphosphatase | EJD96_RS11680 | Not Available | + | 2576282 - 2576884 | 22190.8 |
| hypothetical protein | EJD96_RS11685 | Not Available | + | 2576945 - 2577715 | 28049.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.