Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DFO49_1111 | Not Available | - | 1222246 - 1222887 | 23851.0 |
| Trna-leu | Not Available | Not Available | + | 1223136 - 1223220 | Not Available |
| hypothetical protein | DFO49_1113 | Not Available | - | 1223299 - 1223739 | 15887.2 |
| hypothetical protein | DFO49_1114 | Not Available | - | 1223758 - 1223943 | 6942.82 |
| tartrate dehydrogenase/decarboxylase/d-malate dehydrogenase | DFO49_1115 | Not Available | - | 1224027 - 1225106 | 39376.1 |
| glucose-6-phosphate 1-epimerase | DFO49_1116 | Not Available | - | 1225317 - 1226255 | 35047.9 |
| lysr family transcriptional regulator | DFO49_1117 | Not Available | + | 1226424 - 1227338 | 33944.3 |
| lysr family transcriptional regulator | DFO49_1118 | Not Available | - | 1227349 - 1228323 | 35235.1 |
| molybdate transport repressor mode-like protein | DFO49_1119 | Not Available | - | 1228459 - 1229526 | 39074.9 |
| mfs transporter | DFO49_1120 | Not Available | + | 1229756 - 1231402 | 58279.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.