Faecalibacterium prausnitzii

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Faecalibacterium

Description

Faecalibacterium prausnitzii is a Gram-positive, rod-shaped anaerobic bacterium that thrives in the gastrointestinal tracts of humans and animals. It belongs to the category of mesophilic microorganisms, preferring temperatures between 25-37°C. This microbe is a heterotroph, meaning it obtains energy by breaking down organic compounds rather than producing its own. Specifically, it is a chemoheterotroph, using reducing power from the breakdown of carbohydrates, proteins, and fats to generate energy. Faecalibacterium prausnitzii is a slow-growing microorganism, producing energy through fermentation, a process that involves the conversion of organic compounds into simpler compounds, such as acetate, butyrate, and propionate. These fermentation products are then utilized by the host as energy sources. The bacterium is characterized by its Gram-positive staining, meaning its cell wall contains a thick peptidoglycan layer. Its rod-shaped morphology allows it to efficiently colonize the mucosal lining of the gastrointestinal tract. Faecalibacterium prausnitzii is a strict anaerobe, requiring an oxygen-free environment to thrive. In fact, it is an obligate anaerobe, meaning it is unable to survive in the presence of oxygen. Faecalibacterium prausnitzii is commonly found in the colonic mucosa of humans and animals, where it plays a crucial role in shaping the host's gut microbiome. Its presence has been linked to various health benefits, including the production of short-chain fatty acids that aid in the absorption of nutrients and the modulation of the immune system. Faecalibacterium prausnitzii has been identified as a dominant component of the human gut microbiome, where it contributes to the breakdown of complex carbohydrates and the regulation of the host's metabolic processes. Its importance is further underscored by the fact that changes in its population densities have been linked to various diseases, including inflammatory bowel disease and irritable bowel syndrome. Despite its importance, Faecalibacterium prausnitzii remains a poorly understood microbe, and further research is needed to uncover its full range of functions and interactions with its host.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusFaecalibacterium
SpeciesFaecalibacterium prausnitzii
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Faecalibacterium prausnitzii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Gene Summary

Adenine Count

678569 bp

Thymine Count

664153 bp

Guanine Count

860749 bp

Cytosine Count

848645 bp

Genome Length

3054197 bp

Protein-coding Genes

2784 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
thioredoxin reductaseERS852582_01747O66790-1854655 - 185551229177.1
l-asparaginase 1ERS852582_01748P26900+1855879 - 185688637263.0
predicted membrane proteinERS852582_01749O07923-1856897 - 185722611791.0
azaleucine resistance protein azlcERS852582_01750O07942-1857223 - 185796626943.7
bacteriophytochrome cph2ERS852582_01751Q55434-1858349 - 1861015100559.0
predicted membrane proteinERS852582_01752Not Available-1861204 - 186228939712.5
uncharacterised proteinERS852582_01753Not Available-1862305 - 18624846663.65
trna (guanine-n(7)-)-methyltransferaseERS852582_01754Q0SVU9-1862477 - 186324429219.7
alanine--trna ligaseERS852582_01755O57734-1863241 - 186443142245.4
4-alpha-glucanotransferaseERS852582_01756Q59266+1865033 - 186661058040.6

Displaying genes 1731 – 1740 of 13948 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

143 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000837dimethylmaleateC6H6O4Chemical structure of dimethylmaleateNot available
Average142.111Da
Monoisotopic142.027705833Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da

Displaying 1–10 of 143 metabolites