Fusobacterium nucleatum

Gram-negativeRodNon-motileAnaerobe

Kingdom

Fusobacteriati

Phylum

Fusobacteriota

Class

Fusobacteriia

Order

Fusobacteriales

Family

Fusobacteriaceae

Genus

Fusobacterium

Description

Fusobacterium nucleatum is a gram-negative, rod-shaped microbe that thrives in the mesophilic temperature range, categorizing it as a chemoheterotroph, and can be found in all body sites of various species, including the oral cavity, gastrointestinal tract, and genital tract, and is an obligate anaerobe. As a gram-negative microbe, F. nucleatum has a unique outer membrane structure, which plays a crucial role in its pathogenicity and ability to evade the host's immune system. Its rod-shaped morphology allows it to easily adhere to and invade host cells, contributing to its ability to cause disease. The mesophilic temperature preference of F. nucleatum indicates that it grows best in temperatures between 20-45°C, which is typical of most human body temperatures. As a chemoheterotroph, F. nucleatum relies on chemical reactions to obtain energy and organic compounds from its environment, rather than producing its own through photosynthesis or other means. The presence of F. nucleatum in various body sites suggests that it is a highly adaptable microbe, capable of surviving and thriving in different environments. As an obligate anaerobe, F. nucleatum requires the absence of oxygen to grow and survive, which is why it is often found in areas with low oxygen levels, such as the gastrointestinal tract. The ability of F. nucleatum to infect and cause disease in various parts of the body has led to research into its role in certain types of cancer, where it has been found to promote tumor growth and metastasis by suppressing the immune system and creating a pro-tumorigenic microenvironment.

Taxonomy

KingdomFusobacteriati
PhylumFusobacteriota
ClassFusobacteriia
OrderFusobacteriales
FamilyFusobacteriaceae
GenusFusobacterium
SpeciesFusobacterium nucleatum
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Fusobacterium nucleatum
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

Fusobacterium nucleatum


Gene Summary

Adenine Count

906952 bp

Thymine Count

890038 bp

Guanine Count

335938 bp

Cytosine Count

322474 bp

Genome Length

2455598 bp

Protein-coding Genes

2224 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
glycine/betaine abc transporter atp-binding proteinCJ209_08685Not Available-1786312 - 178703427157.3
glycine/betaine abc transporter substrate-binding proteinCJ209_08690Not Available-1787034 - 178857557400.6
marr family transcriptional regulatorCJ209_08695Not Available-1788535 - 178901718796.8
valine--trna ligaseCJ209_08705Not Available-1789830 - 1792493102847.0
gtp-binding proteinCJ209_08710Not Available-1792627 - 179321122879.7
endopeptidase laCJ209_08715Not Available-1793227 - 179553386264.8
atp-dependent clp protease atp-binding subunit clpxCJ209_08720Not Available-1795905 - 179717947471.5
atp-dependent clp protease proteolytic subunitCJ209_08725Not Available-1797192 - 179777321337.6
trigger factorCJ209_08730Not Available-1798224 - 179951948981.5
single-stranded-dna-specific exonuclease recjCJ209_08735Not Available-1799535 - 180120564331.9

Displaying genes 1651 – 1660 of 4228 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

303 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000686vanillateC8H7O4Chemical structure of vanillateNot available
Average167.1388Da
Monoisotopic167.0344337Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 303 metabolites