Fusobacterium ulcerans

Gram-negativeAnaerobe

Kingdom

Fusobacteriati

Phylum

Fusobacteriota

Class

Fusobacteriia

Order

Fusobacteriales

Family

Fusobacteriaceae

Genus

Fusobacterium

Description

Fusobacterium ulcerans is a Gram-negative, obligate anaerobic bacterium that thrives in a temperature range of 37°C to 44°C, indicative of its human pathogenic nature. Metabolically, it is a chemoorganotroph, relying on the oxidation of organic compounds as its energy source. This microbe produces energy through the process of anaerobic respiration, specifically by utilizing the fermentation pathway. In terms of morphology, F. ulcerans is a rod-shaped bacterium, typically measuring 20-50 μm in length and 0.5-1.0 μm in width. Its ability to inhabit various body sites, including the gastrointestinal tract, genitourinary tract, respiratory tract, and soft tissues, highlights its versatility and adaptability. The Gram stain categorizes F. ulcerans as a Gram-negative bacterium, characterized by its thin peptidoglycan layer and outer membrane. This layer provides limited resistance to antibiotics and antimicrobial peptides, making it challenging to treat infections caused by this microbe. F. ulcerans is found in all body sites of its host, often in association with other microorganisms. Its anaerobic nature necessitates an oxygen-free environment, and it is well-suited to thrive in the anaerobic niches of the human body, such as the gut and abscesses. In its natural habitat, F. ulcerans is an obligate anaerobe, unable to survive in the presence of oxygen. However, it can tolerate low levels of oxygen, which may be beneficial in adapting to its various ecological niches. F. ulcerans is notorious for causing necrotizing fasciitis, a severe and potentially life-threatening skin infection. This microbe's ability to secrete potent extracellular enzymes, such as collagenase and gelatinase, enables it to degrade and destroy tissue, leading to extensive necrosis and tissue destruction.

Taxonomy

KingdomFusobacteriati
PhylumFusobacteriota
ClassFusobacteriia
OrderFusobacteriales
FamilyFusobacteriaceae
GenusFusobacterium
SpeciesFusobacterium ulcerans
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen fluid
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fusobacterium ulcerans

Accession NumberNZ_CP028105.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3138 genes

Non-Coding Genes

178 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+20569 - 20580Not Available
Portal proteinC4N20_RS00120Not Available-24924 - 2547521760.2
Baseplate jC4N20_RS00125Not Available-25476 - 2653439804.4
Xkds proteinC4N20_RS00130Not Available-26531 - 2698317902.0
duf2577 family proteinC4N20_RS00135Not Available-26962 - 2751620545.4
Cell wall hydrolaseC4N20_RS00140Not Available-27513 - 2849037198.9
Peptidoglycan-binding lysin domain proteinC4N20_RS00145Not Available-28483 - 2892317278.8
Tail-tape measure proteinC4N20_RS00150Not Available-28937 - 3080868402.7
hypothetical proteinC4N20_RS16410Not Available-30917 - 310635623.94
phage tail assembly chaperoneC4N20_RS00155Not Available-31215 - 3162815658.1

Displaying genes 1 – 10 of 3316 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

258 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 258 metabolites