Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus
Accession NumberMNQV00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | EAJ12_00665 | Not Available | + | 154676 - 155239 | 22530.2 |
| fecr family protein | EAJ12_00670 | Not Available | + | 155310 - 156242 | 35880.6 |
| susc/raga family tonb-linked outer membrane protein | EAJ12_00675 | Not Available | + | 156298 - 159597 | 122204.0 |
| ragb/susd family nutrient uptake outer membrane protein | EAJ12_00680 | Not Available | + | 159616 - 161304 | 64111.6 |
| beta-glycosidase | EAJ12_00685 | Not Available | + | 161390 - 164419 | 114597.0 |
| glycoside hydrolase family 2 | EAJ12_00690 | Not Available | + | 164422 - 167790 | 126868.0 |
| duf4968 domain-containing protein | EAJ12_00695 | Not Available | + | 167804 - 170188 | 91538.3 |
| hypothetical protein | EAJ12_00700 | Not Available | + | 170206 - 172206 | 74739.1 |
| cupin domain-containing protein | EAJ12_00705 | Not Available | - | 172300 - 172791 | 18182.0 |
| pectate lyase | EAJ12_00710 | Not Available | + | 172980 - 174593 | 61375.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
