Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus
Accession NumberMNQV00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gscfa domain protein | EAJ12_00465 | Not Available | + | 85545 - 86531 | 38641.5 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | EAJ12_00470 | Not Available | + | 86507 - 88972 | 92758.0 |
| duf4858 domain-containing protein | EAJ12_00475 | Not Available | + | 89062 - 89625 | 21541.2 |
| exopolygalacturonase | EAJ12_00480 | Not Available | - | 89777 - 91081 | 49161.8 |
| beta-galactosidase | EAJ12_00485 | Not Available | - | 91116 - 94004 | 108868.0 |
| glycoside hydrolase family 28 protein | EAJ12_00490 | Not Available | - | 94281 - 96065 | 66033.2 |
| hypothetical protein | EAJ12_00495 | Not Available | + | 96278 - 96973 | 26762.1 |
| duf229 domain-containing protein | EAJ12_00500 | Not Available | - | 97177 - 98574 | 53462.7 |
| ragb/susd family nutrient uptake outer membrane protein | EAJ12_00505 | Not Available | - | 98615 - 100417 | 69788.8 |
| susc/raga family tonb-linked outer membrane protein | EAJ12_00510 | Not Available | - | 100432 - 103818 | 126550.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
