Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus
Accession NumberMNQV00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 127 protein | EAJ12_01910 | Not Available | + | 483903 - 486308 | 89630.8 |
| s9 family peptidase | EAJ12_01915 | Not Available | + | 486320 - 488563 | 85800.0 |
| pectate lyase | EAJ12_01920 | Not Available | + | 488803 - 490944 | 81660.3 |
| aaa family atpase | EAJ12_01930 | Not Available | - | 492358 - 494085 | 68009.9 |
| l-aspartate oxidase | EAJ12_01935 | Not Available | - | 494335 - 495915 | 58967.6 |
| hypothetical protein | EAJ12_01945 | Not Available | + | 496707 - 497117 | 15494.5 |
| hypothetical protein | EAJ12_01950 | Not Available | + | 497121 - 497534 | 15716.4 |
| dihydrolipoyl dehydrogenase | EAJ12_01955 | Not Available | + | 497550 - 498890 | 47635.7 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | EAJ12_01960 | Not Available | + | 498890 - 500290 | 52306.5 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | EAJ12_01965 | Not Available | + | 500461 - 501303 | 31751.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
