Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus
Accession NumberMNQV00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | EAJ12_01490 | Not Available | - | 366138 - 366578 | 16186.6 |
| had family hydrolase | EAJ12_01500 | Not Available | - | 366816 - 367469 | 24293.1 |
| nitroreductase | EAJ12_01505 | Not Available | + | 367532 - 368032 | 18878.7 |
| oxaloacetate decarboxylase | EAJ12_01510 | Not Available | + | 368300 - 368551 | 8725.21 |
| oxaloacetate decarboxylase | EAJ12_01515 | Not Available | + | 368582 - 370444 | 68971.7 |
| sodium ion-translocating decarboxylase subunit beta | EAJ12_01520 | Not Available | + | 370444 - 371679 | 44261.9 |
| tlpa family protein disulfide reductase | EAJ12_01525 | Not Available | - | 371875 - 373224 | 50445.2 |
| thioredoxin | EAJ12_01530 | Not Available | - | 373226 - 374392 | 44545.2 |
| ragb/susd family nutrient uptake outer membrane protein | EAJ12_01535 | Not Available | - | 374411 - 375901 | 55759.7 |
| susc/raga family tonb-linked outer membrane protein | EAJ12_01540 | Not Available | - | 375922 - 379239 | 122594.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
