Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus
Accession NumberMNQV00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | EAJ12_01380 | Not Available | - | 342956 - 343450 | 18849.7 |
| thymidylate synthase | EAJ12_01385 | Not Available | - | 343534 - 344328 | 30479.3 |
| duf5056 domain-containing protein | EAJ12_01390 | Not Available | - | 344410 - 344739 | 12355.1 |
| sigma-70 family rna polymerase sigma factor | EAJ12_01395 | Not Available | - | 344723 - 345271 | 21091.3 |
| hypothetical protein | EAJ12_01400 | Not Available | - | 345274 - 345981 | 25992.5 |
| rrna cytosine-c5-methyltransferase | EAJ12_01405 | Not Available | + | 346113 - 347540 | 53427.1 |
| dna topoisomerase iii | EAJ12_01410 | Not Available | - | 347677 - 349818 | 79816.9 |
| hypothetical protein | EAJ12_01415 | Not Available | + | 350092 - 350958 | 33226.6 |
| dihydrolipoamide acyltransferase | EAJ12_01420 | Not Available | + | 351191 - 351565 | 13047.7 |
| helicase | EAJ12_01425 | Not Available | - | 351749 - 353641 | 72789.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
