Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus
Gene Summary
Adenine Count
1527061 bp
Thymine Count
1544992 bp
Guanine Count
1154572 bp
Cytosine Count
1125574 bp
Genome Length
5352199 bp
Protein-coding Genes
4433 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase | EAJ12_07635 | Not Available | + | 1804611 - 1806209 | 60242.0 |
| aminopeptidase | EAJ12_07640 | Not Available | + | 1806241 - 1807431 | 45290.6 |
| s9 family peptidase | EAJ12_07645 | Not Available | + | 1807562 - 1809793 | 84409.6 |
| hypothetical protein | EAJ12_07650 | Not Available | + | 1809964 - 1811451 | 56289.0 |
| hypothetical protein | EAJ12_07655 | Not Available | + | 1811510 - 1811890 | 14324.3 |
| hypothetical protein | EAJ12_07660 | Not Available | + | 1811862 - 1812167 | 11612.0 |
| aspartate ammonia-lyase | EAJ12_07665 | Not Available | - | 1812111 - 1813544 | 52251.4 |
| yitt family protein | EAJ12_07670 | Not Available | - | 1813808 - 1814698 | 32573.4 |
| lruc domain-containing protein | EAJ12_07675 | Not Available | - | 1814839 - 1816716 | 71350.9 |
| udp-glucose 4-epimerase gale | EAJ12_07680 | Not Available | - | 1817011 - 1818045 | 37984.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

