Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus
Gene Summary
Adenine Count
1527061 bp
Thymine Count
1544992 bp
Guanine Count
1154572 bp
Cytosine Count
1125574 bp
Genome Length
5352199 bp
Protein-coding Genes
4433 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EAJ12_06975 | Not Available | + | 1639789 - 1644438 | 171830.0 |
| hypothetical protein | EAJ12_06980 | Not Available | + | 1644435 - 1646792 | 89050.7 |
| nucleotidyltransferase | EAJ12_06985 | Not Available | + | 1646927 - 1647838 | 33769.1 |
| arac family transcriptional regulator | EAJ12_06990 | Not Available | - | 1647941 - 1648843 | 35341.9 |
| zinc metallopeptidase | EAJ12_06995 | Not Available | + | 1649055 - 1649735 | 24715.3 |
| hybrid sensor histidine kinase/response regulator | EAJ12_07000 | Not Available | + | 1649949 - 1654271 | 165156.0 |
| duf5060 domain-containing protein | EAJ12_07005 | Not Available | + | 1654436 - 1656040 | 61924.9 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | EAJ12_07010 | Not Available | + | 1656162 - 1656776 | 22216.8 |
| deor/glpr transcriptional regulator | EAJ12_07015 | Not Available | + | 1656788 - 1657543 | 27350.1 |
| transketolase | EAJ12_07020 | Not Available | + | 1657887 - 1658732 | 31469.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

