Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | CK234_01326 | Not Available | + | 1770120 - 1773236 | 113944.0 |
| susd family protein | CK234_01327 | Not Available | + | 1773268 - 1775406 | 79372.8 |
| hypothetical protein | CK234_01328 | Not Available | + | 1775496 - 1775810 | 12080.8 |
| bacterial alpha-l-rhamnosidase 6 hairpin glycosidase domain protein | CK234_01329 | Not Available | + | 1776025 - 1777806 | 66634.2 |
| putative rhamnogalacturonan endolyase, yesw precursor-like | CK234_01330 | Not Available | + | 1777850 - 1779700 | 69354.8 |
| endo-polygalacturonase precursor | CK234_01331 | Not Available | + | 1779814 - 1783101 | 122961.0 |
| putative unsaturated rhamnogalacturonyl hydrolase, yter-like | CK234_01332 | Not Available | + | 1783242 - 1784375 | 43910.2 |
| beta-galactosidase | CK234_01333 | Not Available | - | 1784494 - 1786608 | 80994.3 |
| glycosyl hydrolases family 43 | CK234_01334 | Not Available | - | 1786587 - 1788941 | 89299.9 |
| beta-glucuronidase | CK234_01335 | Not Available | + | 1789153 - 1792020 | 110104.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

