Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1420826 bp
Thymine Count
1424215 bp
Guanine Count
1046299 bp
Cytosine Count
1024853 bp
Genome Length
4918368 bp
Protein-coding Genes
4025 genes
Non-Coding Genes
85 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutaconyl-coa decarboxylase subunit beta | CK234_02176 | Not Available | - | 2813176 - 2814336 | 40880.4 |
| biotin carboxyl carrier protein of acetyl-coa carboxylase | CK234_02177 | Not Available | - | 2814338 - 2814769 | 15152.5 |
| oxaloacetate decarboxylase, gamma chain | CK234_02178 | Not Available | - | 2814793 - 2815722 | 34102.0 |
| putative propionyl-coa carboxylase beta chain 5 | CK234_02179 | Not Available | - | 2815750 - 2817303 | 56473.9 |
| methylmalonyl-coa epimerase | CK234_02180 | Not Available | - | 2817406 - 2817819 | 14910.1 |
| acetyltransferase (gnat) domain protein | CK234_02181 | Not Available | - | 2817976 - 2818956 | 38358.9 |
| f420 biosynthesis protein fbib, c-terminal domain | CK234_02182 | Not Available | + | 2819044 - 2819580 | 20051.4 |
| hypothetical protein | CK234_02183 | Not Available | + | 2819583 - 2819909 | 11882.3 |
| protein of unknown function (duf2520) | CK234_02184 | Not Available | + | 2819909 - 2820715 | 29767.2 |
| putative 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase, kdsc-like | CK234_02185 | Not Available | + | 2820721 - 2821239 | 19125.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

