Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei
Accession NumberCXEP00000000.1
Gene Summary
Adenine Count
974197 bp
Thymine Count
974199 bp
Guanine Count
1000803 bp
Cytosine Count
1003303 bp
Genome Length
4647897 bp
Protein-coding Genes
4610 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EPS31_02405 | Not Available | + | 513617 - 515431 | 69695.6 |
| abc transporter permease | EPS31_02410 | Not Available | + | 515432 - 516526 | 40362.6 |
| abc transporter permease | EPS31_02415 | Not Available | + | 516526 - 517551 | 38125.7 |
| microcin c abc transporter atp-binding protein yejf | EPS31_02420 | Not Available | + | 517553 - 519142 | 58636.6 |
| hypothetical protein | EPS31_02425 | Not Available | - | 519146 - 519490 | 12525.9 |
| bcr/cfla family multidrug efflux mfs transporter | EPS31_02430 | Not Available | - | 519823 - 521013 | 43355.4 |
| 16s rrna pseudouridine(516) synthase rsua | EPS31_02435 | Not Available | - | 521041 - 521736 | 25866.8 |
| dead/deah box helicase | EPS31_02440 | Not Available | + | 521886 - 523646 | 66546.0 |
| 50s ribosomal protein l25 | EPS31_02445 | Not Available | + | 523771 - 524055 | 10693.1 |
| nucleoid-associated protein yejk | EPS31_02450 | Not Available | - | 524194 - 525201 | 37825.6 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


