Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei
Accession NumberCXEP00000000.1
Gene Summary
Adenine Count
974197 bp
Thymine Count
974199 bp
Guanine Count
1000803 bp
Cytosine Count
1003303 bp
Genome Length
4647897 bp
Protein-coding Genes
4610 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s12 methylthiotransferase | SAMEA3891730_04467 | Not Available | + | 4429633 - 4430958 | 49614.6 |
| putative membrane protein ylif | SAMEA3891730_04468 | Not Available | - | 4431005 - 4431721 | 26863.8 |
| putative transporter | SAMEA3891730_04469 | Not Available | - | 4432393 - 4433616 | 44916.0 |
| Trna-sec(p) | Not Available | Not Available | + | 4433909 - 4433999 | Not Available |
| sai integrase | SAMEA3891730_04471 | Not Available | + | 4434303 - 4435487 | 45450.3 |
| shia-like protein | SAMEA3891730_04472 | Not Available | + | 4435899 - 4436942 | 40306.6 |
| insertion element is2 transposase insd | SAMEA3891730_04473 | Not Available | - | 4437234 - 4437614 | 14302.8 |
| autoinducer 2 abc transporter atp-binding protein lsra | SAMEA3891730_04474 | Not Available | + | 4438094 - 4438387 | 10289.9 |
| autoinducer 2 abc transporter atp-binding protein lsra | SAMEA3891730_04475 | Not Available | + | 4438436 - 4439530 | 39973.3 |
| autoinducer 2 abc transporter permease lsrc | SAMEA3891730_04476 | Not Available | + | 4439524 - 4439832 | 11396.4 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


