Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella sonnei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Shigella sonnei
Accession NumberCXEP00000000.1
Gene Summary
Adenine Count
974197 bp
Thymine Count
974199 bp
Guanine Count
1000803 bp
Cytosine Count
1003303 bp
Genome Length
4647897 bp
Protein-coding Genes
4610 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative phosphatidate cytidiltransferase | SAMEA3891730_03988 | Not Available | + | 3984986 - 3985402 | 14631.5 |
| putative hydrolase | SAMEA3891730_03989 | Not Available | + | 3985418 - 3987175 | 65774.9 |
| pap2 family protein | SAMEA3891730_03990 | Not Available | + | 3987213 - 3988481 | 48778.4 |
| azoreductase | SAMEA3891730_03991 | Not Available | - | 3988532 - 3989137 | 21642.9 |
| atp-dependent rna helicase hrpa | SAMEA3891730_03992 | Not Available | + | 3989338 - 3993240 | 149056.0 |
| duf218 domain | SAMEA3891730_03993 | Not Available | + | 3993512 - 3994192 | 25176.9 |
| transposase family | SAMEA3891730_03994 | Not Available | + | 3994249 - 3994551 | 11164.3 |
| inner membrane transporter yjem | SAMEA3891730_04015 | Not Available | - | 4005170 - 4005358 | 7040.05 |
| lysyl-trna synthetase | SAMEA3891730_04016 | Not Available | - | 4005577 - 4006554 | 36978.1 |
| fumarate reductase flavoprotein subunit | SAMEA3891730_04017 | Not Available | + | 4006879 - 4008687 | 65975.5 |
Pathways
16 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


