Shigella sonnei

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella sonnei is a gram-negative, rod-shaped bacterium that thrives in a temperature range of 25-37°C, falling under the category of mesophiles. As a chemoheterotroph, it obtains its energy by breaking down organic compounds, specifically requiring a supply of nutrients from its environment. S. sonnei's energy production involves the breakdown of glucose and other carbon sources through fermentation, involving the conversion of glucose into lactate and ethanol as byproducts. The bacterium's cell wall is characterized by a gram-negative staining pattern, indicating the presence of a thin peptidoglycan layer and an outer membrane. Its rod-shaped morphology allows it to fit within the tight spaces of the human gut, where it can colonize and reproduce. S. sonnei is known to infect various body sites, including the gastrointestinal tract, urinary tract, and genital tract, making it a relevant pathogen in both humans and animals. Its ability to infect multiple sites is attributed to its ability to survive and replicate in a variety of environments. In terms of oxygen preference, S. sonnei is an obligate anaerobe, meaning it cannot tolerate oxygen and grows best in the absence of oxygen. This is reflected in its ability to inhibit the growth of other microorganisms that require oxygen, allowing it to dominate the environment. Shigella sonnei is often referred to as the most common cause of reported Shigella infections worldwide, with a global distribution. Its mode of transmission is primarily through the fecal-oral route, where infected individuals contaminate their environment with the bacterium, which is then ingested by others.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella sonnei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella sonnei
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Gene Summary

Adenine Count

1301421 bp

Thymine Count

1305416 bp

Guanine Count

1346729 bp

Cytosine Count

1321909 bp

Genome Length

5290188 bp

Protein-coding Genes

4871 genes

Non-Coding Genes

238 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
3-keto-l-gulonate-6-phosphate decarboxylase uladEPS31_06505Not Available+1329455 - 133010523650.4
l-ribulose-5-phosphate 3-epimerase ulaeEPS31_06510Not Available+1330115 - 133096932036.4
l-ribulose-5-phosphate 4-epimeraseEPS31_06515Not Available+1330969 - 133165525281.2
duf1471 domain-containing proteinEPS31_06520Not Available-1331784 - 133205910129.9
30s ribosomal protein s6EPS31_06525Not Available+1332386 - 133278115187.9
primosomal replication protein nEPS31_06530Not Available+1332788 - 133310211472.9
30s ribosomal protein s18EPS31_06535Not Available+1333107 - 13333348986.94
50s ribosomal protein l9EPS31_06540Not Available+1333376 - 133382515770.0
duf2686 family proteinEPS31_06545Not Available-1333896 - 133469029746.0
is200/is605 family transposaseEPS31_06550Not Available-1335133 - 13353307664.38

Displaying genes 1361 – 1370 of 24990 in total

Pathways

16 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites