Shigella sonnei str. 75/02

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella sonnei str. 75/02 is a Gram-negative, rod-shaped bacterium that typically appears as single cells or in pairs. This strain optimally grows at a temperature of 37.0°C, which corresponds with the normal human body temperature, suggesting an adaptation to a host-associated habitat. As a chemoorganotroph, it derives energy from organic compounds, reflecting its reliance on a nutrient-rich environment often found within host organisms. Additionally, S. sonnei str. 75/02 is classified as a facultative anaerobe, indicating its capability to survive in both aerobic and anaerobic conditions, which may enhance its persistence in diverse microenvironments within the host. The ability of S. sonnei to thrive in the human gastrointestinal tract, coupled with its metabolic flexibility, positions it as a notable member of the enteric microbiota. Understanding these traits can provide insights into its survival strategies and potential interactions within the host, including its response to variations in oxygen availability and nutrient composition. This adaptability may contribute to its competitive edge in colonizing the gut, underscoring the importance of host-associated environments in shaping the physiological traits of pathogenic microbes like Shigella sonnei.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella sonnei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella sonnei str. 75/02
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella sonnei str. 75/02

Accession NumberNZ_CP019689.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4444 genes

Non-Coding Genes

549 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
sos response-associated peptidaseBZ172_RS26725Not Available+4856810 - 485748125096.7
rna-guided endonuclease insq/tnpb family proteinBZ172_RS26730Not Available-4857521 - 485872945850.2
is3-like element is2 family transposaseBZ172_RS26735Not Available+4858737 - 48589257661.36
is1-like element is1a family transposaseBZ172_RS26740Not Available-4858941 - 485963826455.2
is3 family transposaseBZ172_RS26750Not Available+4859840 - 486106846260.4
helix-turn-helix transcriptional regulatorBZ172_RS26755Not Available-4861588 - 486238530711.2
raf kinase inhibitor-like protein ybclBZ172_RS26760Not Available-4862395 - 486294619355.8
multidrug efflux smr transporter emreBZ172_RS26765Not Available-4863115 - 486344711915.0
is3-like element is2 family transposaseBZ172_RS30460Not Available+4863628 - 48637564966.74
flagellar hook-basal body complex protein flieBZ172_RS26775Not Available-4863781 - 486409511127.5

Displaying genes 4951 – 4960 of 4993 in total

Pathways

16 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites